Migdałek G, Nowak J, Saługa M, Cieślak E, Szczepaniak M, Ronikier M, Marcussen T, Słomka A, Kuta E, 2017. No evidence of contemporary interploidy gene flow between the closely related European woodland violets Viola reichenbachiana and V. riviniana (sect. Viola, Violaceae). Plant Biology 19: 542–551 DOI

Pitteloud C, Arrigo N, Suchan T, Mastretta-Yanes A, Vila R, Dincă V, Hernández-Roldán J, Brockmann E, Chittaro Y, Kleckova I, Fumagalli L, Buerki S, Pellissier L, Alvarez N, 2017. Climatic niche evolution is faster in sympatric than allopatric lineages of the butterfly genus Pyrgus. Proceedings of the Royal Society B 285: 20170208 DOI

Schmid S, Genevest R, Gobet E, Suchan T, Sperisen C, Tinner W, Alvarez N, 2017. HyRAD-X, a versatile method combining exome capture and RAD sequencing to extract genomic information from ancient DNA. Methods in Ecology and Evolution 8: 1374–1388 DOI

Suchan T, Espíndola A, Rutschmann S, Emerson BC, Gori K, Dessimoz C, Arrigo N, Ronikier M, Alvarez N, 2017. Assessing the potential of RAD-sequencing to resolve phylogenetic relationships within species radiations: the fly genus Chiastocheta (Diptera: Anthomyiidae) as a case study. Molecular Phylogenetics and Evolution 114: 189–198 DOI

Bartók A, Hurdu BI, Szatmari P-M, Ronikier M, Puşcaş M, Novikoff A, Bartha L, Vonica G, 2016. New records for the high-mountain flora of the Făgăraş Mts. (Southern Carpathians) with discussion on ecological preferences and distribution of studied taxa in the Carpathians. Contribuţii Botanice 51: 77–153 LINK

Kajtoch Ł, Cieślak E, Varga Z, Paul W, Mazur MA, Sramkó G, Kubisz D, 2016. Phylogeographic patterns of steppe species in Eastern Central Europe: a review and the implications for conservation. Biodiversity and Conservation 25: 2309–2339 DOI

Mráz P, Barabas D, Lengyelová L, Turis P, Schmotzer A, Janišová M, Ronikier M, 2016. Vascular plant endemism in the Western Carpathians: spatial patterns, environmental correlates and taxon traits. Biological Journal of the Linnean Society 119: 630–648 DOI

Mráz P, Ronikier M, 2016. Biogeography of the Carpathians: evolutionary and spatial facets of biodiversity. Biological Journal of the Linnean Society 119: 528-559 DOI

Paul W, Cieślak E, Ronikier M, Migdałek G, Słomka A, Żabicka J, 2016. Low genetic diversity of declining Viola uliginosa (Violaceae) at its southern range limits in Poland. Acta Biologica Cracoviensia s. Botanica 58: 71–82 DOI

Suchan T, Pitteloud C, Gerasimova NS, Kostikova A, Schmid S, Arrigo N, Pajkovic M, Ronikier M, Alvarez N, 2016. Hybridization capture using RAD probes (hyRAD), a new tool for performing genomic analyses on museum collection specimens. PLoS ONE 11(3): e0151651 DOI

Szczepaniak M, Kamiński R, Kuta E, Słomka A, Heise W, Cieślak E, 2016. Natural hybridization between Gladiolus palustris and G. imbricatus inferred from morphological, molecular and reproductive evidence. Preslia 88: 137–161 LINK PDF

Wacnik A, Nalepka D, Granoszewski W, Walanus A, Madeyska E, Cywa K, Szczepanek K, Cieślak E, 2016. Development of modern forest zones in the Beskid Niski Mts. and adjacent area (Western Carpathians) in the late Holocene: A palaeobotanical perspective. Quaternary International 415: 303–324 DOI

Cieślak E, Cieślak J, Szeląg Z, Ronikier M, 2015. Genetic structure of Galium cracoviense (Rubiaceae): a naturally rare species with an extremely small distribution range. Conservation Genetics 16: 929–938 DOI

Slazak B, Sliwinska E, Saługa M, Ronikier M, Bujak J, Słomka A, Göransson U, Kuta E, 2015. Micropropagation of Viola uliginosa (Violaceae) for endangered species conservation and for somaclonal variation-enhanced cyclotide biosynthesis. Plant Cell, Tissue and Organ Culture 120: 179–190 DOI

Kuta E, Jędrzejczyk-Korycińska M, Cieślak E, Rostański A, Szczepaniak M, Migdałek G, Wąsowicz P, Suda J, Combik M, Słomka A, 2014. Morphological versus genetic diversity of Viola reichenbachiana and V. riviniana (sect. Viola, Violaceae) from soils differing in heavy metal content. Plant Biology 16: 924–934 DOI

Ronikier M, Zalewska-Gałosz J, 2014. Independent evolutionary history between the Balkan ranges and more northerly mountains in Campanula alpina s.l. (Campanulaceae): genetic divergence and morphological segregation of taxa. Taxon 63: 116–131 DOI

Cieślak E, 2013. Variation and genetic structure of Serratula lycopifolia populations (Vill.) Kern. (Asteraceae) in Poland and adjacent regions. Acta Societatis Botanicorum Poloniae 82: 67–75 DOI

Stachurska-Swakoń A, Cieślak E, Ronikier M, 2013. Phylogeography of a subalpine tall-herb Ranunculus platanifolius (Ranunculaceae) reveals two main genetic lineages in the European mountains. Botanical Journal of the Linnean Society 171: 413–428 DOI

Ronikier M, Schneeweiss GM, Schönswetter P, 2012. The extreme disjunction between Beringia and Europe in Ranunculus glacialis s.l. (Ranunculaceae) does not coincide with the deepest genetic split – a story of the importance of temperate mountain ranges in arctic-alpine phylogeography. Molecular Ecology 21: 5561–5578 DOI

Stachurska-Swakoń A, Cieślak E, Ronikier M, 2012. Phylogeography of subalpine tall-herb species in Central Europe: the case of Cicerbita alpina. Preslia 84: 121–140